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Home > Organization > Divisions and Independent Research Units > Division of Cancer Evolution > Research Papers > 2015

2015

  1. Ahn, J. S., Kim, H. J., Kim, Y. K., Jung, S. H., Yang, D. H., Lee, J. J., Lee, I. K., Kim, N. Y., Minden, M. D., Jung, C. W., Jang, J. H., Kim, H. J., Moon, J. H., Sohn, S. K., Won, J. H., Kim, S. H., Kim, N., Yoshida K., Ogawa, S., Kim, D. D.: Adverse prognostic effect of homozygous TET2 mutation on the relapse risk of acute myeloid leukemia in patients of normal karyotype. Haematologica, 100: e351-353 (2015).
  2. Chiba, K., Shiraishi, Y., Nagata, Y., Yoshida K., Imoto, S., Ogawa, S., Miyano, S.: Genomon ITDetector: a tool for somatic internal tandem duplication detection from cancer genome sequencing data. Bioinformatics, 31: 116-118 (2015).
  3. Garg, M., Nagata, Y., Kanojia, D., Mayakonda, A., Yoshida K., Haridas Keloth, S., Zang, Z. J., Okuno, Y., Shiraishi, Y., Chiba, K., Tanaka, H., Miyano, S., Ding, L. W., Alpermann, T., Sun, Q. Y., Lin, D. C., Chien, W., Madan, V., Liu, L. Z., Tan, K. T., Sampath, A., Venkatesan, S., Inokuchi, K., Wakita, S., Yamaguchi, H., Chng, W. J., Kham, S. K., Yeoh, A. E., Sanada, M., Schiller, J., Kreuzer, K. A., Kornblau, S. M., Kantarjian, H. M., Haferlach, T., Lill, M., Kuo, M. C., Shih, L. Y., Blau, I. W., Blau, O., Yang, H., Ogawa, S., Koeffler, H. P.: Profiling of somatic mutations in acute myeloid leukemia with FLT3-ITD at diagnosis and relapse. Blood, 126: 2491-2501 (2015).
  4. Hira, A., Yoshida K., Sato, K., Okuno, Y., Shiraishi, Y., Chiba, K., Tanaka, H., Miyano, S., Shimamoto, A., Tahara, H., Ito, E., Kojima, S., Kurumizaka, H., Ogawa, S., Takata, M., Yabe, H., Yabe, M.: Mutations in the gene encoding the E2 conjugating enzyme UBE2T cause Fanconi anemia. Am J Hum Genet, 96: 1001-1007 (2015).
  5. Hoshino, A., Nomura, K., Hamashima, T., Isobe, T., Seki, M., Hiwatari, M., Yoshida K., Shiraishi, Y., Chiba, K., Tanaka, H., Miyano, S., Ogawa, S., Takita, J., Kanegane, H.: Aggressive transformation of anaplastic large cell lymphoma with increased number of ALK-translocated chromosomes. Int J Hematol, 101: 198-202 (2015).
  6. Huang, D., Nagata, Y., Grossmann, V., Radivoyevitch, T., Okuno, Y., Nagae, G., Hosono, N., Schnittger, S., Sanada, M., Przychodzen, B., Kon, A., Polprasert, C., Shen, W., Clemente, M. J., Phillips, J. G., Alpermann, T., Yoshida K., Nadarajah, N., Sekeres, M. A., Oakley, K., Nguyen, N., Shiraishi, Y., Shiozawa, Y., Chiba, K., Tanaka, H., Koeffler, H. P., Klein, H. U., Dugas, M., Aburatani, H., Miyano, S., Haferlach, C., Kern, W., Haferlach, T., Du, Y., Ogawa, S., Makishima, H.: BRCC3 mutations in myeloid neoplasms. Haematologica, 100: 1051-1057 (2015).
  7. Kanojia, D., Nagata, Y., Garg, M., Lee, D. H., Sato, A., Yoshida K., Sato, Y., Sanada, M., Mayakonda, A., Bartenhagen, C., Klein, H. U., Doan, N. B., Said, J. W., Mohith, S., Gunasekar, S., Shiraishi, Y., Chiba, K., Tanaka, H., Miyano, S., Myklebost, O., Yang, H., Dugas, M., Meza-Zepeda, L. A., Silberman, A. W., Forscher, C., Tyner, J. W., Ogawa, S., Koeffler, H. P.: Genomic landscape of liposarcoma. Oncotarget, 6: 42429-42444 (2015).
  8. Kataoka, K., Nagata, Y., Kitanaka, A., Shiraishi, Y., Shimamura, T., Yasunaga, J., Totoki, Y., Chiba, K., Sato-Otsubo, A., Nagae, G., Ishii, R., Muto, S., Kotani, S., Watatani, Y., Takeda, J., Sanada, M., Tanaka, H., Suzuki, H., Sato, Y., Shiozawa, Y., Yoshizato, T., Yoshida K., Makishima, H., Iwanaga, M., Ma, G., Nosaka, K., Hishizawa, M., Itonaga, H., Imaizumi, Y., Munakata, W., Ogasawara, H., Sato, T., Sasai, K., Muramoto, K., Penova, M., Kawaguchi, T., Nakamura, H., Hama, N., Shide, K., Kubuki, Y., Hidaka, T., Kameda, T., Nakamaki, T., Ishiyama, K., Miyawaki, S., Yoon, S. S., Tobinai, K., Miyazaki, Y., Takaori-Kondo, A., Matsuda, F., Takeuchi, K., Nureki, O., Aburatani, H., Watanabe, T., Shibata, T., Matsuoka, M., Miyano, S., Shimoda, K., Ogawa, S.: Integrated molecular analysis of adult T cell leukemia/lymphoma. Nat Genet, 47: 1304-1315 (2015).
  9. Kawashima-Goto, S., Imamura, T., Seki, M., Kato, M., Yoshida K., Sugimoto, A., Kaneda, D., Fujiki, A., Miyachi, M., Nakatani, T., Osone, S., Ishida, H., Taki, T., Takita, J., Shiraishi, Y., Chiba, K., Tanaka, H., Miyano, S., Ogawa, S., Hosoi, H.: Identification of a homozygous JAK3 V674A mutation caused by acquired uniparental disomy in a relapsed early T-cell precursor ALL patient. Int J Hematol, 101: 411-416 (2015).
  10. Kurtovic-Kozaric, A., Przychodzen, B., Singh, J., Konarska, M. M., Clemente, M. J., Otrock, Z. K., Nakashima, M., Hsi, E. D., Yoshida K., Shiraishi, Y., Chiba, K., Tanaka, H., Miyano, S., Ogawa, S., Boultwood, J., Makishima, H., Maciejewski, J. P., Padgett, R. A.: PRPF8 defects cause missplicing in myeloid malignancies. Leukemia, 29: 126-136 (2015).
  11. Okuno, Y., Hoshino, A., Muramatsu, H., Kawashima, N., Wang, X., Yoshida K., Wada, T., Gunji, M., Toma, T., Kato, T., Shiraishi, Y., Iwata, A., Hori, T., Kitoh, T., Chiba, K., Tanaka, H., Sanada, M., Takahashi, Y., Nonoyama, S., Ito, M., Miyano, S., Ogawa, S., Kojima, S., Kanegane, H.: Late-Onset Combined Immunodeficiency with a Novel IL2RG Mutation and Probable Revertant Somatic Mosaicism. J Clin Immunol, 35: 610-614 (2015).
  12. Ono, R., Hasegawa, D., Hirabayashi, S., Kamiya, T., Yoshida K., Yonekawa, S., Ogawa, C., Hosoya, R., Toki, T., Terui, K., Ito, E., Manabe, A.: Acute megakaryoblastic leukemia with acquired trisomy 21 and GATA1 mutations in phenotypically normal children. Eur J Pediatr, 174: 525-531 (2015).
  13. Polprasert, C., Schulze, I., Sekeres, M. A., Makishima, H., Przychodzen, B., Hosono, N., Singh, J., Padgett, R. A., Gu, X., Phillips, J. G., Clemente, M., Parker, Y., Lindner, D., Dienes, B., Jankowsky, E., Saunthararajah, Y., Du, Y., Oakley, K., Nguyen, N., Mukherjee, S., Pabst, C., Godley, L. A., Churpek, J. E., Pollyea, D. A., Krug, U., Berdel, W. E., Klein, H. U., Dugas, M., Shiraishi, Y., Chiba, K., Tanaka, H., Miyano, S., Yoshida K., Ogawa, S., Muller-Tidow, C., Maciejewski, J. P.: Inherited and Somatic Defects in DDX41 in Myeloid Neoplasms. Cancer Cell, 27: 658-670 (2015).
  14. Sakaguchi, H., Muramatsu, H., Okuno, Y., Makishima, H., Xu, Y., Furukawa-Hibi, Y., Wang, X., Narita, A., Yoshida K., Shiraishi, Y., Doisaki, S., Yoshida, N., Hama, A., Takahashi, Y., Yamada, K., Miyano, S., Ogawa, S., Maciejewski, J. P., Kojima, S.: Aberrant DNA Methylation Is Associated with a Poor Outcome in Juvenile Myelomonocytic Leukemia. PLoS One, 10: e0145394 (2015).
  15. Seki, M., Nishimura, R., Yoshida K., Shimamura, T., Shiraishi, Y., Sato, Y., Kato, M., Chiba, K., Tanaka, H., Hoshino, N., Nagae, G., Shiozawa, Y., Okuno, Y., Hosoi, H., Tanaka, Y., Okita, H., Miyachi, M., Souzaki, R., Taguchi, T., Koh, K., Hanada, R., Kato, K., Nomura, Y., Akiyama, M., Oka, A., Igarashi, T., Miyano, S., Aburatani, H., Hayashi, Y., Ogawa, S., Takita, J.: Integrated genetic and epigenetic analysis defines novel molecular subgroups in rhabdomyosarcoma. Nat Commun, 6: 7557 (2015).
  16. Shiota, M., Yang, X., Kubokawa, M., Morishima, T., Tanaka, K., Mikami, M., Yoshida K., Kikuchi, M., Izawa, K., Nishikomori, R., Okuno, Y., Wang, X., Sakaguchi, H., Muramatsu, H., Kojima, S., Miyano, S., Ogawa, S., Takagi, M., Hata, D., Kanegane, H.: Somatic mosaicism for a NRAS mutation associates with disparate clinical features in RAS-associated leukoproliferative disease: a report of two cases. J Clin Immunol, 35: 454-458 (2015).
  17. Suzuki, H., Aoki, K., Chiba, K., Sato, Y., Shiozawa, Y., Shiraishi, Y., Shimamura, T., Niida, A., Motomura, K., Ohka, F., Yamamoto, T., Tanahashi, K., Ranjit, M., Wakabayashi, T., Yoshizato, T., Kataoka, K., Yoshida K., Nagata, Y., Sato-Otsubo, A., Tanaka, H., Sanada, M., Kondo, Y., Nakamura, H., Mizoguchi, M., Abe, T., Muragaki, Y., Watanabe, R., Ito, I., Miyano, S., Natsume, A., Ogawa, S.: Mutational landscape and clonal architecture in grade II and III gliomas. Nat Genet, 47: 458-468 (2015).
  18. Wang, R., Yoshida K., Toki, T., Sawada, T., Uechi, T., Okuno, Y., Sato-Otsubo, A., Kudo, K., Kamimaki, I., Kanezaki, R., Shiraishi, Y., Chiba, K., Tanaka, H., Terui, K., Sato, T., Iribe, Y., Ohga, S., Kuramitsu, M., Hamaguchi, I., Ohara, A., Hara, J., Goi, K., Matsubara, K., Koike, K., Ishiguro, A., Okamoto, Y., Watanabe, K., Kanno, H., Kojima, S., Miyano, S., Kenmochi, N., Ogawa, S., Ito, E.: Loss of function mutations in RPL27 and RPS27 identified by whole-exome sequencing in Diamond-Blackfan anaemia. Br J Haematol, 168: 854-864 (2015).
  19. Wang, X., Muramatsu, H., Okuno, Y., Sakaguchi, H., Yoshida K., Kawashima, N., Xu, Y., Shiraishi, Y., Chiba, K., Tanaka, H., Saito, S., Nakazawa, Y., Masunari, T., Hirose, T., Elmahdi, S., Narita, A., Doisaki, S., Ismael, O., Makishima, H., Hama, A., Miyano, S., Takahashi, Y., Ogawa, S., Kojima, S.: GATA2 and secondary mutations in familial myelodysplastic syndromes and pediatric myeloid malignancies. Haematologica, 100: e398-401 (2015).
  20. Yamaguchi, H., Sakaguchi, H., Yoshida K., Yabe, M., Yabe, H., Okuno, Y., Muramatsu, H., Takahashi, Y., Yui, S., Shiraishi, Y., Chiba, K., Tanaka, H., Miyano, S., Inokuchi, K., Ito, E., Ogawa, S., Kojima, S.: Clinical and genetic features of dyskeratosis congenita, cryptic dyskeratosis congenita, and Hoyeraal-Hreidarsson syndrome in Japan. Int J Hematol, 102: 544-552 (2015).
  21. Yang, X., Hoshino, A., Taga, T., Kunitsu, T., Ikeda, Y., Yasumi, T., Yoshida K., Wada, T., Miyake, K., Kubota, T., Okuno, Y., Muramatsu, H., Adachi, Y., Miyano, S., Ogawa, S., Kojima, S., Kanegane, H.: A female patient with incomplete hemophagocytic lymphohistiocytosis caused by a heterozygous XIAP mutation associated with non-random X-chromosome inactivation skewed towards the wild-type XIAP allele. J Clin Immunol, 35: 244-248 (2015).
  22. Yoshizato, T., Dumitriu, B., Hosokawa, K., Makishima, H., Yoshida K., Townsley, D., Sato-Otsubo, A., Sato, Y., Liu, D., Suzuki, H., Wu, C. O., Shiraishi, Y., Clemente, M. J., Kataoka, K., Shiozawa, Y., Okuno, Y., Chiba, K., Tanaka, H., Nagata, Y., Katagiri, T., Kon, A., Sanada, M., Scheinberg, P., Miyano, S., Maciejewski, J. P., Nakao, S., Young, N. S., Ogawa, S.: Somatic Mutations and Clonal Hematopoiesis in Aplastic Anemia. N Engl J Med, 373: 35-47 (2015).
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