Research Papers

2022

1. Yuki Ozato, Yasuhiro Kojima(Co-First), Yuta Kobayashi, Yuuichi Hisamatsu, Takeo Toshima, Yusuke Yonemura, Takaaki Masuda, Kouichi Kagawa, Yasuhiro Goto, Mitsuaki Udo, Ayako Gamachi, Kiyomi Imamura, Yuta Kuze, Jyunko Zenkou, Ayako Suzuki, Atsushi Niida, Takeharu Sakamoto, Haruka Hirose, Shuto Hayashi, Jun Koseki, Eiji Oki, Satoshi Fukuchi, Masanobu Oshima, Taro Tobo, Satoshi Nagayama, Yuichiro Doki, Hidetoshi Eguchi, Masaki Mori, Tatsuhiro Shibata, Yutaka Suzuki, Teppei Shimamura, Koshi Mimori, Integration of spatial and single-cell transcriptomics for investigating intratumor heterogeneity of colorectal cancer, Cell Reports, IN PRESS.
2. Keiki Nagaharu, Yasuhiro Kojima (Co-First), Haruka Hirose, Kodai Minoura, Kunihiko Hinohara, Hirohito Minami, Yuki Kageyama, Yuka Sugimoto, Masahiro Masuya, Shigeru Nii, Masahide Seki, Yutaka Suzuki, Isao Tawara, Teppei Shimamura, Naoyuki Katayama, Hiroyoshi Nishikawa, Kohshi Ohishi, A bifurcation concept for B-lymphoid/plasmacytoid dendritic cells with largely fluctuating transcriptome dynamics, Cell Reports, Volume 40, Issue 9, 2022, 111260, 2022.

2021

1. Sho Isoyama, Shigeyuki Mori, Daisuke Sugiyama, Yasuhiro Kojima, Yasuko Tada, Kohei Shitara Kunihiko Hinohara, Shingo Dan, Hiroyoshi Nishikawa. Cancer immunotherapy with PI3K and PD-1 dual-blockade via optimal modulation of T cell activation signal. Journal for ImmunoTherapy of Cancer, 9(8), e002279, 2021.

2020

1. Yasuhiro Kojima, Hirotaka Matsumoto, Hisanori Kiryu. Estimation of population genetic parameters using an EM algorithm and sequence data from experimental evolution populations. Bioinformatics, 36(1), 221-231., 2020.

2019

1. Hisanori Kiryu, Yuto Ichikawa, Yasuhiro Kojima. TMRS: an algorithm for computing the time to the most recent substitution event from a multiple alignment column. Algorithms for Molecular Biology, 14, 23, 2019.